S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Fhl1p	YGL030W	PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	SC medium; mid-log phase
		PubMed Wade JT et al., Nature, 2004 Dec 23;432(7020):1054-8	Direct	Chip-on-chip	N/A	S288c	YPD
		PubMed Schawalder SB et al., Nature, 2004 Dec 23;432(7020):1058-61	Indirect	RT-PCR - wt vs TF mutant	Positive	W303	YPAD medium (2% Bactopeptone, 1% yeast extract, 0.01% adenine, 2% Glucose), 30.C.
		PubMed Martin DE et al., Cell, 2004 Dec 29;119(7):969-79	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Rudra D et al., EMBO J, 2005 Feb 9;24(3):533-42	Direct	ChIP	N/A	S288c	N/A
		PubMed Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705	Direct	Chip-on-chip	N/A	S288c	YPD
		PubMed Lavoie H et al., PLoS Biol, 2010 Mar 9;8(3):e1000329	Direct	Chip-on-chip	N/A	S288c	YPD
		PubMed Knight B et al., Genes Dev, 2014 Aug 1;28(15):1695-709	Direct	ChIP	N/A	S288c	YPD
		PubMed Reja R et al., Genes Dev, 2015 Sep 15;29(18):1942-54	Direct	ChIP-exo	N/A	S288c	Strain was grown to OD600 0.8 at 25.C in 500 mL of YPD
		PubMed Kim MS et al., Biochim Biophys Acta, 2016 Aug;1859(8):1004-13	Direct	ChIP	N/A	S288c	Cells BY4741 ifh1 DELTA::loxP FHL1-3HA::kanMX6 p416-PIFH1-IFH1-13Myc-TADH1 and BY4741 ifh1 DELTA::loxP FHL1-3HA::kanMX6 p416-PIFH1-IFH1 T681A-13Myc-TADH1 were grown in YPD medium, and ChIP assay was performed with anti-Myc antibodies for detection of the association of Fhl1-3HA at the RP gene promoters
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C