The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Fkh2p
|
YLR131C
|
PubMed
Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4Zhu G et al., Nature, 2000 Jul 6;406(6791):90-4 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303 |
15, 30, 45, 60 min after release of G1 phase synchronization |
PubMed
Pic A et al., EMBO J, 2000 Jul 17;19(14):3750-61Pic A et al., EMBO J, 2000 Jul 17;19(14):3750-61 |
Direct |
EMSA |
N/A |
S288c |
SD medium |
PubMed
Simon I et al., Cell, 2001 Sep 21;106(6):697-708Simon I et al., Cell, 2001 Sep 21;106(6):697-708 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Pic-Taylor A et al., Mol Cell Biol, 2004 Nov;24(22):10036-46Pic-Taylor A et al., Mol Cell Biol, 2004 Nov;24(22):10036-46 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Δfkh1 cells synchronized with α-factor (block and release of G1 phase) |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Ostrow AZ et al., PLoS One, 2014;9(2):e87647Ostrow AZ et al., PLoS One, 2014;9(2):e87647 |
Direct |
Chip-on-chip |
N/A |
S288c |
Unspecified medium, 23.C, synchronized with alpha-factor, hydroxyurea or nocodazole |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|