S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Gln3p	YFL021W	PubMed Coffman JA et al., J Bacteriol, 1997 Jun;179(11):3416-29	Indirect	lacZ - wt vs TF mutant	Positive	TCY1	Minimal medium + proline
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	SC medium; mid-log phase
		PubMed Georis I et al., Mol Cell Biol, 2009 Jul;29(13):3803-15	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	proline
		PubMed Georis I et al., J Biol Chem, 2011 Dec 30;286(52):44897-912	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	Methionine sulfoximine
		PubMed Georis I et al., RNA Biol, 2015;12(8):824-37	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	wt (TB50) vs gln3DELTA (FV005) mutant, cells grown in YNB medium with proline (Pro) or treated with ammonium and methionine sulfoximine (Am. C Msx); GAT1 expression was assayed using 7 pairs of primers along the open reading frame as shown on the insert
		PubMed Ponomarova O et al., Cell Syst, 2017 Oct 25;5(4):345-357.e6	Indirect	RNA-seq - wt vs TF mutant	Negative	S90	wt and DELTAgln3 cells were grown in YPAD medium
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C