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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Gln3p YPL265W PubMed external link Shamji AF et al., Curr Biol, 2000 Dec 14-28;10(24):1574-81Shamji AF et al., Curr Biol, 2000 Dec 14-28;10(24):1574-81 Indirect Microarray analysis - wt vs TF mutant Positive S288c 30 min 50 nM treatment with rapamycin in YPD
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c SC medium; mid-log phase
PubMed external link Staschke KA et al., J Biol Chem, 2010 May 28;285(22):16893-911Staschke KA et al., J Biol Chem, 2010 May 28;285(22):16893-911 Indirect Microarray analysis - wt vs TF mutant Positive EG328-1A RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 10 mM 3-AT
Indirect Microarray analysis - wt vs TF mutant Positive EG328-1A RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 200 nM Rapamycin
Indirect Microarray analysis - wt vs TF mutant Positive EG328-1A RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 10 mM 3-AT
Indirect Microarray analysis - wt vs TF mutant Positive EG328-1A RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 200 nM Rapamycin
Indirect Microarray analysis - wt vs TF mutant Positive EG328-1A RNA prepared from wt and DELTAgln3 cells treated for 1 h with 10 mM 3-AT
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Ponomarova O et al., Cell Syst, 2017 Oct 25;5(4):345-357.e6Ponomarova O et al., Cell Syst, 2017 Oct 25;5(4):345-357.e6 Indirect RNA-seq - wt vs TF mutant Positive S90 wt and DELTAgln3 cells were grown in YPAD medium
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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