S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Gln3p	YPR035W	PubMed Coschigano PW et al., Mol Cell Biol, 1991 Feb;11(2):822-32	Indirect	Enzyme activity - wt vs TF mutant	Positive	S288c	Glutamate - Yeast cells were grown with glutamate as a nitrogen source
		PubMed Stanbrough M et al., Proc Natl Acad Sci U S A, 1995 Oct 10;92(21):9450-4	Indirect	lacZ - wt vs TF mutant	Positive	S288c	cells grown on urea as nitrogen source
		PubMed Blinder D et al., J Bacteriol, 1995 Jul;177(14):4190-3	N/A		N/A	S288c	N/A
		PubMed Cunningham TS et al., J Bacteriol, 1996 Jun;178(12):3470-9	Direct	EMSA	N/A	S288c	in vitro
		PubMed Cox KH et al., Yeast, 1999 Jun 15;15(8):703-13	Indirect	Microarray analysis - wt vs TF mutant	Negative	TCY1	Wickerham's minimal medium with 0,6% glucose and 0,1% of proline
		PubMed Shamji AF et al., Curr Biol, 2000 Dec 14-28;10(24):1574-81	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	30 min 50 nM treatment with rapamycin in YPD
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	SC medium; mid-log phase
		PubMed Staschke KA et al., J Biol Chem, 2010 May 28;285(22):16893-911	Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	RNA prepared from wt and DELTAgcn2DELTAgln3 cells treated for 1 h with 10 mM 3-AT
			Indirect	Microarray analysis - wt vs TF mutant	Positive	EG328-1A	RNA prepared from wt and DELTAgcn4DELTAgln3 cells treated for 1 h with 10 mM 3-AT
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Ponomarova O et al., Cell Syst, 2017 Oct 25;5(4):345-357.e6	Indirect	RNA-seq - wt vs TF mutant	Negative	S90	wt and DELTAgln3 cells were grown in YPAD medium
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C