Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Ino2p
|
YHR018C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Hoppen J et al., Yeast, 2005 Jun;22(8):601-13Hoppen J et al., Yeast, 2005 Jun;22(8):601-13 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
SS92.3-1 |
Depressing conditions: 5 microM . inositol +5 microM choline |
Indirect |
lacZ - wt vs TF mutant |
Positive |
SS92.3-1 |
Repressing conditions: 200 microM inositol +2mM choline |
PubMed
Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50 |
Indirect |
Microarray analysis - wt vs TF overexpression |
Positive |
N/A |
Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h |
PubMed
Chumnanpuen P et al., BMC Syst Biol, 2013;():Chumnanpuen P et al., BMC Syst Biol, 2013;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Steady-state aerobic chemostat 30.C |
PubMed
Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4):Bergenholm D et al., mSystems, 2018 Jul-Aug;3(4): |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Steady state aerobic chemostat cultivation at 30 .C in glucose-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Steady state aerobic chemostat cultivation at 30 .C in ethanol-limited minimal medium containing vitamins and trace metals and maintained at pH 5.0 |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
, , ;():, , ;(): |
Indirect |
RNA-seq - wt vs TF overexpression |
Negative |
SQ01 |
SC medium |