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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Leu3p YBR068C PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c SC medium; mid-log phase
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
Direct ChIP-exo N/A CEN.PK 113-5D Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h
PubMed external link Muñoz SA et al., Microbiology (Reading), 2020 Jan;166(1):85-92Muñoz SA et al., Microbiology (Reading), 2020 Jan;166(1):85-92 Direct ChIP Positive SBCY01 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM proline as a nitrogen source + 1.3mM leucine for 1h
Direct ChIP N/A SBCY02 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive SBCY01 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM ammonium sulfate as a nitrogen source
Indirect lacZ - wt vs TF mutant Positive SBCY01 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM ammonium sulfate as a nitrogen source + 1.3mM leucine for 1h
Indirect lacZ - wt vs TF mutant Positive SBCY01 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive SBCY01 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect lacZ - wt vs TF mutant Positive SBCY01 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive SBCY01 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive SBCY20 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive SBCY20 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive SBCY20 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
PubMed external link Börlin CS et al., FEMS Microbiol Lett, 2020 Jul 1;367(13):Börlin CS et al., FEMS Microbiol Lett, 2020 Jul 1;367(13): Direct ChIP-seq N/A CEN.PK 113-5D After 70 h of growth in minimal medium with 2% glucose, at 30.C and 200 rpm, cells were treated with 100 mg/L isoleucine for 2 hours.
Direct ChIP-seq N/A CEN.PK 113-5D After 70 h of growth in minimal medium with 2% glucose, at 30.C and 200 rpm, cells were treated with 100 mg/L leucine for 2 hours.
Direct ChIP-seq N/A CEN.PK 113-5D After 70 h of growth in minimal medium with 2% glucose, at 30.C and 200 rpm, cells were treated with 100 mg/L valine for 2 hours.
Direct ChIP-seq N/A CEN.PK 113-5D After 70 h of growth in minimal medium with 2% glucose, at 30.C and 200 rpm, cells were treated with 20 mg/L leucine for 2 hours.
Direct ChIP-seq N/A CEN.PK 113-5D After 70 h of growth in minimal medium with 2% glucose, at 30.C and 200 rpm.
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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