The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Mac1p
|
YLR214W
|
PubMed
Jungmann J et al., EMBO J, 1993 Dec 15;12(13):5051-6Jungmann J et al., EMBO J, 1993 Dec 15;12(13):5051-6 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Labbé S et al., J Biol Chem, 1997 Jun 20;272(25):15951-8Labbé S et al., J Biol Chem, 1997 Jun 20;272(25):15951-8 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Yamaguchi-Iwai Y et al., J Biol Chem, 1997 Jul 11;272(28):17711-8Yamaguchi-Iwai Y et al., J Biol Chem, 1997 Jul 11;272(28):17711-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
presence of CuSO4 |
PubMed
Martins LJ et al., J Biol Chem, 1998 Sep 11;273(37):23716-21Martins LJ et al., J Biol Chem, 1998 Sep 11;273(37):23716-21 |
Direct |
DNA footprinting |
Positive |
S288c |
Minimal medium; mid-log phase |
PubMed
Gross C et al., J Biol Chem, 2000 Oct 13;275(41):32310-6Gross C et al., J Biol Chem, 2000 Oct 13;275(41):32310-6 |
Indirect |
Microarray analysis - wt vs TF overexpression |
Positive |
S288c |
low copper complete medium |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Keller G et al., Eukaryot Cell, 2005 Nov;4(11):1863-71Keller G et al., Eukaryot Cell, 2005 Nov;4(11):1863-71 |
Direct |
ChIP |
N/A |
S288c |
SC medium 0,3mM CuSO4 |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Nasuno R et al., PLoS One, 2014 Nov 25;9(11):e113788Nasuno R et al., PLoS One, 2014 Nov 25;9(11):e113788 |
Direct |
ChIP |
N/A |
S288c |
100 microM SNAP (S-nitroso-N-acetylpenicillamine) |
PubMed
, , ;():, , ;(): |
Indirect |
RT-PCR - wt vs TF overexpression |
Positive |
1308 |
NO-treated biofilm cells |
Indirect |
RT-PCR - wt vs. TF mutant |
Positive |
1308 |
NO-treated biofilm cells |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|