The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Msn2p
|
YBR054W
|
PubMed
Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91Lai LC et al., Mol Cell Biol, 2005 May;25(10):4075-91 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
SSGal-TEA medium + anaerobiosis (2 generations) |
PubMed
Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303-1A |
Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min) |
PubMed
Hazelwood LA et al., Appl Environ Microbiol, 2009 Nov;75(21):6876-85Hazelwood LA et al., Appl Environ Microbiol, 2009 Nov;75(21):6876-85 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
IMZ066 |
Carbon-limiting (25 g/L glucose, 5 g/L (NH4)2SO4, 3 KH2PO4, 0.5 g/L MgSO4.7H2O, 0.0045 g/L ZnSO4.7H2O) |
PubMed
Huebert DJ et al., Mol Cell Biol, 2012 May;32(9):1645-53Huebert DJ et al., Mol Cell Biol, 2012 May;32(9):1645-53 |
Direct |
Chip-on-chip |
N/A |
S288c |
H2O2 treatment |
PubMed
Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938 |
Direct |
ChIP-seq |
N/A |
BY5764 |
YPD 30.C |
PubMed
Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
W303-1A |
YPD 30.C |
PubMed
Yu R et al., Sci Adv, 2019 Jul;5(7):eaav1165Yu R et al., Sci Adv, 2019 Jul;5(7):eaav1165 |
Indirect |
RT-PCR - wt vs. TF double mutant |
Positive |
YWD2000 |
YPD medium |
|