The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Msn2p
|
YDL204W
|
PubMed
Puig S et al., Yeast, 2000 Jan 30;16(2):139-48Puig S et al., Yeast, 2000 Jan 30;16(2):139-48 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Exponential-phase cells cultivated in YPD supplemented with 0.4% NaCl |
PubMed
Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7Berry DB et al., Mol Biol Cell, 2008 Nov;19(11):4580-7 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4741 |
YPD+0.5 mM H2O2 |
PubMed
Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium containing 0,8M glucose (glucose "osmotic" stress) |
PubMed
Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
10 min shift to pH=8 |
PubMed
Bontron S et al., Cell Rep, 2013 Jan 31;3(1):16-22Bontron S et al., Cell Rep, 2013 Jan 31;3(1):16-22 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
Rapamycin treatment |
PubMed
MartÃnez-Montañés F et al., Eukaryot Cell, 2013 May;12(5):636-47MartÃnez-Montañés F et al., Eukaryot Cell, 2013 May;12(5):636-47 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
0,4M NaCl |
PubMed
Hansen AS et al., Mol Syst Biol, 2013;():Hansen AS et al., Mol Syst Biol, 2013;(): |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
1-NM-PP1 |
PubMed
Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862Pfanzagl V et al., Mol Biol Cell, 2018 Nov 15;29(23):2848-2862 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303-1A |
YPD 30.C |
|