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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Msn4p
|
YDR258C
|
PubMed
Causton HC et al., Mol Biol Cell, 2001 Feb;12(2):323-37Causton HC et al., Mol Biol Cell, 2001 Feb;12(2):323-37 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium + 0,05M succinic acid, pH 4,0 |
PubMed
Hasan R et al., Mol Microbiol, 2002 Jul;45(1):233-41Hasan R et al., Mol Microbiol, 2002 Jul;45(1):233-41 |
Indirect |
Proteomics - wt vs TF mutant |
Positive |
YPH98 |
Oxidative stess; cells grown in YNB medium to exponential phase exposed to 0.5 mM H2O2 for 30 min |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21Eastmond DL et al., J Biol Chem, 2006 Oct 27;281(43):32909-21 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303-1A |
Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min) |
PubMed
Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33Casado C et al., Biochem J, 2011 Sep 15;438(3):523-33 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
10 min shift to pH=8 |
PubMed
Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938Kuang Z et al., Elife, 2017 Sep 26;6(0):e29938 |
Direct |
ChIP-seq |
N/A |
BY5764 |
YPD 30.C |
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