The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Rap1p
|
YCR012W
|
PubMed
Chambers A et al., Mol Cell Biol, 1989 Dec;9(12):5516-24Chambers A et al., Mol Cell Biol, 1989 Dec;9(12):5516-24 |
Direct |
EMSA |
N/A |
S288c |
N/A |
PubMed
Graham IR et al., Mol Cell Biol, 1999 Nov;19(11):7481-90Graham IR et al., Mol Cell Biol, 1999 Nov;19(11):7481-90 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
NCYC 1445 |
SC medium; mid-log phase |
PubMed
Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705Kasahara K et al., Mol Cell Biol, 2007 Oct;27(19):6686-705 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD |
PubMed
Lavoie H et al., PLoS Biol, 2010 Mar 9;8(3):e1000329Lavoie H et al., PLoS Biol, 2010 Mar 9;8(3):e1000329 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Platt JM et al., Genes Dev, 2013 Jun 15;27(12):1406-20Platt JM et al., Genes Dev, 2013 Jun 15;27(12):1406-20 |
Direct |
ChIP |
N/A |
S288c |
Senescence |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|