The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Rfx1p
|
YGR180C
|
PubMed
Huang M et al., Cell, 1998 Sep 4;94(5):595-605Huang M et al., Cell, 1998 Sep 4;94(5):595-605 |
Direct |
ChIP |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Klinkenberg LG et al., Eukaryot Cell, 2006 Jul;5(7):1007-17Klinkenberg LG et al., Eukaryot Cell, 2006 Jul;5(7):1007-17 |
Indirect |
lacZ - wt vs TF mutant |
Negative |
MZ233-20 |
Cells were grown aerobically in SC-uracil |
PubMed
Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71Venters BJ et al., Genome Res, 2009 Mar;19(3):360-71 |
Direct |
ChIP |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|