S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rlm1p	YDR055W	PubMed Jung US et al., Mol Microbiol, 1999 Dec;34(5):1049-57	Indirect	Northern blot - wt vs TF mutant	Positive	EG123	Cells grown to mid-log phase in raffinose-containing medium, then shifted to galactose-containing medium for 4 h
			Indirect	Northern blot - wt vs TF mutant	Positive	EG123	Cells grown to mid-log phase in YEPD, shifted from 23C to 39C
		PubMed Terashima H et al., Mol Gen Genet, 2000;():	Direct	lacZ - wt vs mutant promoter sequence	Positive	YPH499	5 microg/mL doxycycline
		PubMed GarcÃa R et al., J Biol Chem, 2004 Apr 9;279(15):15183-95	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Congo red
		PubMed Shaner L et al., Curr Genet, 2008 Jul;54(1):1-11	Indirect	lacZ - wt vs TF mutant	Positive	S288c	Yeast strains were grown to mid-log phase (OD600» 0.6) at 30°C and ß-galactosidase activity assayed after a 1.5 h heat shock at 37°C
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Sanz AB et al., Mol Biol Cell, 2012 Jul;23(14):2805-17	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Congo red
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C