S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rox1p	YPR065W	PubMed Deckert J et al., Mol Cell Biol, 1995 Nov;15(11):6109-17	N/A		N/A	S288c	N/A
		PubMed Deckert J et al., Genetics, 1995 Mar;139(3):1149-58	Indirect	lacZ - wt vs TF mutant	Negative	S288c	Anaerobiosis
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Positive	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
		PubMed Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	YPD 30.C 0.1 mM H2O2
		PubMed Castro-Prego R et al., Biochem J, 2009 Dec 14;425(1):235-43	Direct	ChIP	N/A	S288c	Hypoxia
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Denby CM et al., Proc Natl Acad Sci U S A, 2012 Mar 6;109(10):3874-8	Indirect	RT-PCR - wt vs TF mutant	Negative	S288c	Normoxia
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C