S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rpn4p	YDL147W	PubMed Workman CT et al., Science, 2006 May 19;312(5776):1054-9	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33	Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4742	YPD+1mM selenite 60 min
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Kruegel U et al., PLoS Genet, 2011 Sep;7(9):e1002253	Indirect	Proteomics - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Spasskaia DS et al., Mol Biol (Mosk), 2011 Jul-Aug;45(4):642-51	Direct	Dam-Rpn4 interaction with the target gene (measuring level of methylation of the target promoter)	N/A	S288c	YPD medium; mid-log phase
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C