S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Rtg1p	YLR304C	PubMed Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8	Indirect	Northern blot - wt vs TF mutant	Positive	PSY142	rho0 cells cultivated in YP medium with 2% raffinose
		PubMed Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308	Indirect	Microarray analysis - wt vs TF mutant	Positive	PSY142 (MATALFA leu2 lys2 ura3rho+)	Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase
		PubMed Chen XJ et al., Science, 2005 Feb 4;307(5710):714-7	Indirect	Western blot - wt vs TF mutant	Positive	S288C	glucose medium
		PubMed Chen XJ et al., Proc Natl Acad Sci U S A, 2007 Aug 21;104(34):13738-43	Indirect	Western blot - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Lin AP et al., J Biol Chem, 2011 Sep 30;286(39):33737-46	Indirect	Western blot - wt vs TF mutant	Positive	S288c	YPGal medium; mid-log phase
		PubMed Kingsbury JM et al., Hum Mol Genet, 2016 Aug 15;25(16):3524-3538	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	cells with IDP1R148H (analogous to human Idh1R132) with strong GAL1 promoter, grown in Synthetic Complete Galactose 6 and 24h of incubation, show the same effect when compared to WT (S288c) cells.
		PubMed Romero AM et al., Biochim Biophys Acta Gene Regul Mech, 2019 Sep;1862(9):194414	Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	30.C in SC (+Fe) and SC with 100 microM BPS (-Fe) for 9 hours
			Direct	RNA Pol II ChIP WT vs TF mutant	Positive	BY4741	At time zero, 100 microM BPS was added to cells exponentially growing in SC at 30.C