Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Rtg3p
|
YAL067C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR101C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR104W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR105C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YBR129C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR132C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR135W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR138C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR151W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR157C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR158W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR160W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR162W-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR163W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YBR164C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR166C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR167C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YBR169C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR181C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR182C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR183W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR185C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YBR187W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR189W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR191W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR201W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR203W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR207W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YBR221C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR244W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR247C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YBR253W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR254C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR255W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR264C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR278W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR288C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR290W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR291C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR295W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR296C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR297W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YCL067C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YCL065W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YCL059C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YCL049C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCL031C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YCL027W
|
PubMed
Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
SIGMA1278b |
FUS1-lacZ expression in wt vs DELTArtg3 was monitored in the indicated strains in mid-log phase grown in YEPD medium. |
YCL026C-B
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YCL025C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YCR005C
|
PubMed
Jia Y et al., Mol Cell Biol, 1997 Mar;17(3):1110-7Jia Y et al., Mol Cell Biol, 1997 Mar;17(3):1110-7 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
logarithmic-phase cultures grown on YPR medium (YP + 2% raffinose) |
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
YPRaffinose medium |
PubMed
Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
SD medium early stationary phase |
PubMed
Chen L et al., Yeast, 2010 Jun;27(6):345-59Chen L et al., Yeast, 2010 Jun;27(6):345-59 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
BY4742 |
CIT2-lacZ reporter gene was transformed into a wt vs isogenic bHLH knock-out RO+ strains (DELTArtg3 with mitochondrial DNA). CIT2-lacZ expression was assayed from cultures grown in the absence (I-C-) or presence of inositol and choline (I+C+) containing either low-phosphate (Pi low) or high-phosphate (Pi high). |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4742 |
CIT2-lacZ reporter gene was transformed into a wt vs isogenic bHLH knock-out RO+ strains (DELTArtg3 with mitochondrial DNA). CIT2-lacZ expression was assayed from cultures grown in the absence (I-C-) or presence of inositol and choline (I+C+) containing either low-phosphate (Pi low) or high-phosphate (Pi high). |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Miceli MV et al., Front Genet, 2012;():Miceli MV et al., Front Genet, 2012;(): |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
NaCl (osmotic stress) |
PubMed
Barreto L et al., Environ Microbiol, 2012 Nov;14(11):3026-42Barreto L et al., Environ Microbiol, 2012 Nov;14(11):3026-42 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
Without KCl |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Romero AM et al., Biochim Biophys Acta Gene Regul Mech, 2019 Sep;1862(9):194414Romero AM et al., Biochim Biophys Acta Gene Regul Mech, 2019 Sep;1862(9):194414 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 |
30.C in SC (+Fe) and SC with 100 microM BPS (-Fe) for 9 hours |
PubMed
, , ;():, , ;(): |
Indirect |
Western blot - wt vs TF mutant |
Positive |
W303-1B |
YPR medium: 1% Yeast extract (DIFCO), 2% Bacto Peptone (DIFCO), 2% raffinose |
YCR006C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YCR009C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YCR010C
|
PubMed
Podholová K et al., Oncotarget, 2016 Mar 29;7(13):15299-314Podholová K et al., Oncotarget, 2016 Mar 29;7(13):15299-314 |
Indirect |
Western blot - wt vs TF mutant |
Positive |
S288c |
strains occurring in alkali phase, Lower and upper regions cells separated from 14-day-old giant colonies |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR013C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR018C-A
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YCR019W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YCR020C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR020C-A
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YCR020W-B
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YCR021C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YCR031C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR034W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR059C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR060W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR061W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YCR087W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR090C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YCR095C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YCR096C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YCR097W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YCR105W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCR107W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDL248W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL241W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL239C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL238C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL235C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL227C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL219W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL218W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL215C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL201W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL197C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL191W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL187C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL176W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDL170W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YDL149W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL136W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL135C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL130W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL121C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL120W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL113C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL110C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDL105W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL082W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL075W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL067C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL066W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL061C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL051W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL050C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL049C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL046W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL044C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YDL036C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL028C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL023C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL022W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL018C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDL014W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL013W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YDL012C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDL001W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDR009W
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YDR011W
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YDR012W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR032C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDR036C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR038C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR040C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR041W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YDR042C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR043C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR064W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR066C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR067C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR068W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR069C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR070C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR071C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR077W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR078C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR079W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR084C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR089W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR090C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDR098C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR100W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDR111C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR112W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR127W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR131C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR133C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR134C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR139C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR146C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR151C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR154C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR155C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR167W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR171W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR178W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR179C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR179W-A
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR202C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR209C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR210W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR216W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YDR234W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR270W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDR272W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR274C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR276C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR279W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR289C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR305C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR314C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR317W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YDR321W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR322C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR339C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR342C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDR343C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR345C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR357C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR380W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR384C
|
PubMed
Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
YPRaffinose medium |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR385W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR391C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR403W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR406W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YDR447C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR453C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR457W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDR469W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR473C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDR481C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YDR482C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR483W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR494W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDR497C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR508C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YDR509W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR510W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YDR511W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR519W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR522C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YDR525W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR533C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR534C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR545W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL072W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YEL071W
|
PubMed
Chelstowska A et al., Yeast, 1999 Sep 30;15(13):1377-91Chelstowska A et al., Yeast, 1999 Sep 30;15(13):1377-91 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
SD medium early stationary phase |
PubMed
Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
NaCl (osmotic stress) |
PubMed
Barreto L et al., Environ Microbiol, 2012 Nov;14(11):3026-42Barreto L et al., Environ Microbiol, 2012 Nov;14(11):3026-42 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
Without KCl |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Romero AM et al., Biochim Biophys Acta Gene Regul Mech, 2019 Sep;1862(9):194414Romero AM et al., Biochim Biophys Acta Gene Regul Mech, 2019 Sep;1862(9):194414 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
BY4741 |
30.C in SC (+Fe) and SC with 100 microM BPS (-Fe) for 9 hours |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YEL070W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL069C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL066W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL065W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL060C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL059W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL051W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YEL050C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YEL040W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL035C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL028W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YEL026W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL011W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YEL010W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER001W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YER002W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER009W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER011W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER013W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER014W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER015W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER024W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER026C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER028C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YER029C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER030W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER031C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER035W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER037W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER044C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER044C-A
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER053C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER056C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER060W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER062C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER065C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER066C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER067W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER069W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER072W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER073W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER084W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER091C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YER092W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER100W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER102W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER110C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER121W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER124C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER126C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YER128W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YER129W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YER130C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER131W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YER145C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER157W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER158C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YER175C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YER178W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YER180C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFL053W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL052W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL048C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFL042C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL039C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL034C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFL030W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL028C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFL026W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL020C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL014W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFL010C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFR003C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFR004W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFR008W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YFR010W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFR017C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YFR018C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFR022W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YFR032C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFR033C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YFR035C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFR044C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YFR056C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YFR055W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YGL263W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL258W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL255W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL253W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL236C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL234W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL232W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL231C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL212W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL208W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL205W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL184C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL169W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YGL166W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL159W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YGL148W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL126W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL106W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL103W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL101W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL098W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL096W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL080W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL075C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL066W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL062W
|
PubMed
Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96Ruiz-Roig C et al., Mol Biol Cell, 2012 Nov;23(21):4286-96 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
NaCl (osmotic stress) |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL059W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL055W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL045W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL038C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL031C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL028C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL021W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGL009C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGL007W
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YGL001C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YGR002C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR012W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR014W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR019W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YGR020C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR030C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR034W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR043C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YGR049W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR050C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YGR064W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR066C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR070W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR071C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YGR072W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YGR085C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR095C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR101W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR118W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR120C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR122W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR126W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR135W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR136W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR137W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR138C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR142W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR143W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR144W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR146C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR148C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR180C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR183C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR188C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YGR192C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR203W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR207C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR208W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR209C
|
PubMed
Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3):Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3): |
Indirect |
GFP - wt vs TF mutant |
Negative |
S288c |
Cells were grown overnight at 30.C with 106 rotary shaking (250 rpm) to the density of 2 x 106 cells mL-1 in liquid YPD medium |
Indirect |
GFP - wt vs TF mutant |
Negative |
MATa his3DELTA1 leu2DELTA0 met15DELTA0 ura3DELTA0 TRX2-GFP |
Trx2-GFP mutant vs Trx2-GFP DELTArtg3 mutant: cells were grown in YPD medium |
YGR211W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR213C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR218W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YGR224W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR225W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR230W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR234W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR236C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR243W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR250C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR253C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR260W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR266W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR267C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR271W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YGR272C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YGR275W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR277C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YGR279C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR282C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR283C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR286C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YGR287C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL050C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL048W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL047C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YHL043W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL040C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YHL035C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YHL033C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHL032C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL031C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHL030W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YHL028W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL025W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL024W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL016C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL010C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHL008C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR004C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR005C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR010W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR013C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR018C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR021C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR025W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR030C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR033W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR037W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YHR041C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR051W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Osmotic stress; Exponential phase cells cultivated in YPD growth medium supplemented with 0.4 M NaCl |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR053C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR055C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR060W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR063C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR071W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR075C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR081W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YHR104W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YHR121W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR136C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YHR137W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR139C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR142W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR146W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR156C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YHR161C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YHR162W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YHR163W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR171W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR178W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR183W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR189W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR195W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR207C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR208W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YHR214W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR214W-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL164C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL162W
|
PubMed
Chow J et al., mSphere, 2019 Mar 6;4(2):Chow J et al., mSphere, 2019 Mar 6;4(2): |
Indirect |
RT-PCR - wt vs. TF mutant |
Positive |
S1278b |
YEP-Gal (2% agar), 24h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL155C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL139C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL136W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YIL121W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL117C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL116W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL112W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL111W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL094C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL083C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL076W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL062C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL057C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YIL056W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YIL055C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL053W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL052C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL045W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL044C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL037C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YIL027C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIL018W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL015W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL013C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL011W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL008W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIL006W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR019C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR021W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR029W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YIR032C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR033W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR034C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YIR035C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR038C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YIR039C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL217W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YJL214W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL208C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL204C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YJL200C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL196C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL190C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL189W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL188C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL187C
|
PubMed
Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407Chen S et al., J Biol Chem, 2010 Apr 2;285(14):10397-407 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
SD medium early stationary phase |
YJL182C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL172W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJL171C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL167W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL166W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL165C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL158C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL155C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL154C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL153C
|
PubMed
Shetty A et al., Eukaryot Cell, 2010 Dec;9(12):1845-55Shetty A et al., Eukaryot Cell, 2010 Dec;9(12):1845-55 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
Without Inositol and Choline high phosphate |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
Without Inositol and Choline low phosphate |
YJL148W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL145W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL144W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YJL143W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL136C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL133W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YJL130C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL126W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL124C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL121C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL105W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL023C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YJL016W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR009C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR010C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR011C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YJR016C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJR019C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR020W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR025C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJR047C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR048W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJR059W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR061W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR073C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR074W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJR077C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR078W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR094W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR096W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR098C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR105W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR109C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YJR110W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR119C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJR122W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR127C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR139C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR146W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJR148W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR149W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJR150C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR153W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJR154W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL221W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YKL220C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL219W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YKL216W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL214C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL206C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL202W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL201C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL196C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL191W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL187C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL179C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YKL164C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL160W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL156W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL149C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL144C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL142W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL141W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL140W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL132C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL131W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL120W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL119C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL110C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL104C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL103C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YKL096W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL096W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL084W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL081W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL071W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YKL067W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YKL062W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL043W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL042W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL030W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL029C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL024C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL016C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL011C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL009W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL008C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YKL006W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL005C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL001C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKR004C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YKR006C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR009C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR012C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR013W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR022C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKR029C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR031C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR034W
|
PubMed
Neklesa TK et al., PLoS Genet, 2009 Jun;5(6):e1000515Neklesa TK et al., PLoS Genet, 2009 Jun;5(6):e1000515 |
Indirect |
GFP - wt vs TF mutant |
Negative |
BY4743 |
15 hour growth in YPD medium containing 20 ng/mL of rapamycin |
YKR039W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YKR040C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR041W
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YKR042W
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YKR053C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR056W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YKR059W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR075C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YKR079C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKR089C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YKR093W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YKR102W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLL067C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL061W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL060C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL056C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL055W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLL041C
|
PubMed
Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Osmotic stress; Exponential phase cells cultivated in YPD growth medium supplemented with 0.4 M NaCl |
YLL037W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLL034C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLL025W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL023C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL015W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLL013C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLL005C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLL004W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLL002W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLL001W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLR009W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR027C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR029C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR037C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR038C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR040C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR041W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR042C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR049C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR053C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR061W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR062C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR063W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR075W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR076C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR082C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLR089C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR102C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR107W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLR109W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR110C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YLR113W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YLR119W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR130C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLR136C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR140W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR141W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR142W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR147C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR154C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR156W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR164W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR167W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR168C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR173W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR178C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR189C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR194C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR195C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR197W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR200W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR210W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR213C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR216C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR217W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR225C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR231C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR232W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR251W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR254C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR258W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR262C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR262C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR266C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR267W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR276C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLR287C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR292C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR294C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR297W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR299W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR300W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR302C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR304C
|
PubMed
Liao X et al., Cell, 1993 Jan 15;72(1):61-71Liao X et al., Cell, 1993 Jan 15;72(1):61-71 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chen XJ et al., Proc Natl Acad Sci U S A, 2007 Aug 21;104(34):13738-43Chen XJ et al., Proc Natl Acad Sci U S A, 2007 Aug 21;104(34):13738-43 |
Indirect |
Western blot - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YLR305C
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YLR308W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR316C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLR317W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YLR318W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLR325C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR327C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YLR339C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR340W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR343W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR346C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR348C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR349W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR359W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR372W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR388W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR390W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR395C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR397C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YLR411W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR412W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR414C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR416C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YLR420W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR421C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR425W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR435W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR437C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR438W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR441C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YLR449W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML131W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YML130C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML128C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YML123C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML122C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML110C
|
PubMed
Hagerman RA et al., Biochim Biophys Acta, 2002;():Hagerman RA et al., Biochim Biophys Acta, 2002;(): |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
Rtg1wt (ALFA ura3 leu2 lys2) |
Early log phase cells treated with YN medium supplemented with 1 mM oleate for 2 h |
Indirect |
lacZ - wt vs TF mutant |
Positive |
Rtg1wt (ALFA ura3 leu2 lys2) |
Cells expressing pCOQ5-lacZ grown in YN medium supplemented with 1 mM oleate for 18 h |
YML108W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML106W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML101C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML094C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML094W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML090W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML089C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML087C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML081C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML073C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML063W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML059C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YML058W-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YML058W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML042W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML036W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML024W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YML022W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YML017W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YML006C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR002W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR006C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR007W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR009W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR011W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR019W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YMR030W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR032W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR034C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR038C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR042W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR043W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR044W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR062C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR067C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR070W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR072W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR074C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR075W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR083W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR090W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR098C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YMR105C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YMR107W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR112C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR116C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR120C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR123W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR133W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR135C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR135W-A
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YMR136W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR142C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR145C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR146C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR159C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR160W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR173W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR173W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR175W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR177W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR178W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR181C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR184W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR186W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR192W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YMR193W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YMR194W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR195W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR203W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR213W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR220W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR225C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR227C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YMR228W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YMR230W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR240C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YMR241W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR244W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR251W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR251W-A
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR255W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR256C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR258C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YMR260C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR266W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR272C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YMR284W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR295C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR299C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR300C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR303C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR305C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR314W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR316W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR319C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR321C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YMR322C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR323W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL310C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL302C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL289W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL283C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL275W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YNL274C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL255C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL248C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL240C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL225C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL209W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL208W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL202W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL195C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL192W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL183C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YNL178W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL174W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL157W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL155W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL154C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL150W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL149C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL148C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL147W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL142W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YNL134C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL098C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL096C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL091W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL090W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL067W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL064C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL058C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL055C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YNL052W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL044W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL043C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL038W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL037C
|
PubMed
Liao X et al., Cell, 1993 Jan 15;72(1):61-71Liao X et al., Cell, 1993 Jan 15;72(1):61-71 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3):Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3): |
Indirect |
GFP - wt vs TF mutant |
Positive |
S288c |
SOD2 repressed cells were grown overnight at 30.C with 106 rotary shaking (250 rpm) to the density of 2 x 106 cells mL-1 in liquid YPD medium |
Indirect |
GFP - wt vs TF mutant |
Positive |
MATa ade2-1 trp1-1 can1-100 leu2-3,112 his3-11,15 ura3 cdc13-1 IDH1-GFP |
Idh1-GFP mutant vs Idh1-GFP DELTArtg3 mutant: cells were grown in YPD medium |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YNL036W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YNL031C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL030W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL029C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL010W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YNL009W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNL007C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNL002C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YNL001W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YNR001C
|
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Direct |
EMSA |
N/A |
PSY142 |
rho+ cells cultivated in YNB 5% glucose + 0.01% glutamate |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
Indirect |
lacZ - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
Indirect |
lacZ - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 5% glucose |
Indirect |
lacZ - wt vs TF mutant |
Positive |
PSY142 |
rho+ cells cultivated in YP medium with 2% raffinose |
Indirect |
lacZ - wt vs TF mutant |
Positive |
PSY142 |
rho+ cells cultivated in YP medium with 5% glucose |
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17Pastor MM et al., J Biol Chem, 2009 Oct 30;284(44):30307-17 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Osmotic stress; Exponential phase cells cultivated in YPD growth medium supplemented with 0.4 M NaCl |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR002C
|
PubMed
Podholová K et al., Oncotarget, 2016 Mar 29;7(13):15299-314Podholová K et al., Oncotarget, 2016 Mar 29;7(13):15299-314 |
Indirect |
Western blot - wt vs TF mutant |
Positive |
S288c |
strains occurring in alkali phase, Lower and upper region cells separated from 14-day-old giant colonies |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR003C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNR015W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YNR017W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR028W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR034W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR034W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR040W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR044W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR050C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR053C
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YNR056C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR067C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR072W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YNR075W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL159C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YOL158C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL155C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL154W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL151W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL150C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL149W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL147C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL145C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YOL144W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL143C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL139C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL138C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL136C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL126C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL122C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL121C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL119C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL118C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL117W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL116W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL113W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL111C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL110W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL109W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL104C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL101C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL094C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL092W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL078W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL077W-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL060C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YOL058W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL045W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL039W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL032W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL030W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL022C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL016C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOL014W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL003C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOL002C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOL001W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YOR009W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR010C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR011W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR021C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR027W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR032C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
YOR036W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR046C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR049C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR051C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR052C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR066W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR084W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR086C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR089C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR100C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR107W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR120W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR135C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR136W
|
PubMed
Liao X et al., Cell, 1993 Jan 15;72(1):61-71Liao X et al., Cell, 1993 Jan 15;72(1):61-71 |
N/A |
|
N/A |
S288c |
N/A |
PubMed
Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8Liu Z et al., Mol Cell Biol, 1999 Oct;19(10):6720-8 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
PSY142 |
rho0 cells cultivated in YP medium with 2% raffinose |
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR142W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR148C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YOR152C
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YOR153W
|
PubMed
Hallstrom TC et al., J Biol Chem, 2000 Dec 1;275(48):37347-56Hallstrom TC et al., J Biol Chem, 2000 Dec 1;275(48):37347-56 |
Indirect |
lacZ - wt vs TF mutant |
N/A |
S288c |
N/A |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YOR167C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR173W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR177C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR179C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR182C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR184W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR186W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR198C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR202W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR203W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR210W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR219C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR220W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR225W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR226C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR227W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR230W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR232W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR237W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR242C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR246C
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YOR247W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YOR248W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR261C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR265W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR271C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR273C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR274W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR276W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR277C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR293W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR298W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR298C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR302W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YOR303W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR306C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR313C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR315W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR316C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR317W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YOR327C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR333C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YOR338W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR348C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR349W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR351C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR357C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR374W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR375C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YOR377W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR378W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR381W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR382W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR383C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR385W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YOR389W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YOR391C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL273W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL272C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL271W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL268W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YPL265W
|
PubMed
Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7Guaragnella N et al., J Biol Chem, 2003 Nov 14;278(46):45882-7 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
YPRaffinose medium |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YPL262W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL252C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL249C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL241C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL237W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL225W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL223C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL222W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL203W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL201C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL200W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL199C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL196W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL186C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL185W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL177C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL171C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL170W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL154C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YPL147W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL137C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YPL135W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL134C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL129W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL125W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YPL124W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YPL117C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL111W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YPL093W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YPL092W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL091W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL090C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL081W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL079W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL075W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL071C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL070W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL066W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL058C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL054W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL034W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPL026C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL021W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YPL016W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL014W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPL012W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YPR001W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
PC538 |
YPD medium |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR002W
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR006C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR015C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR018W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR020W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR027C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR035W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YPR038W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YPR039W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YPR040W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YPR060C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPR061C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR062W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR069C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR073C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPR078C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR079W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR080W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR114W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR119W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YPR124W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR133W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR138C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YPR149W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YPR156C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR157W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR166C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YPR183W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR184W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YPR185W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR192W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR198W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YAL062W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YAL061W
|
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YAL056W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YAL055W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YAL054C
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YAL053W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YAL033W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YAL029C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YAL020C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YAL014C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YAL005C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YAR015W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YAR018C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YAR035W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YAR061W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YAR064W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YAR068W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL103C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL099W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL095W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL092W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL083C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL082C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL081W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL079W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YBL075C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL069W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL063W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL058W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL043W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YBL042C
|
PubMed
Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308Epstein CB et al., Mol Biol Cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
PSY142 (MATALFA leu2 lys2 ura3rho+) |
Mitochondrial dysfunction; rho0 petites grown in YP raffinose (2%) medium to exponential phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL030C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBL028C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL027W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL026W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL018C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBL015W
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR004C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR005W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR008C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YBR009C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR010W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR029C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR031W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR050C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR051W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR061C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR066C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR068C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR069C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR072W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR082C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR084C-A
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YBR087W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL089W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL088W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
YJL076W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YJL062W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL053W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YJL052W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YJL031C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YCL074W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YDL182W
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDR524C-B
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YER138C
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
YIR018C-A
|
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
YJL133C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YDL131W
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
YKL138C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YLR307C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YMR194C-B
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR015W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR036W-A
|
PubMed
Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000Holland P et al., Nucleic Acids Res, 2019 Jun 4;47(10):4986-5000 |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in anaerobic glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in ethanol limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in nitrogen limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
Direct |
ChIP-exo |
N/A |
CEN.PK 113-5D |
Cells were cultivated in chemostats in respiratory glucose limited medium with a dilution rate of 0.1 h-1 at 30.C. Samples were collected after steady state was achieved for 48-60 h |
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR056W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |
YHR047C
|
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
YNCK0020C
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YNCE0002W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YDR210C-D
|
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
YNCL0032C
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YNCK0010W
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YSC0017
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YSC0018
|
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
YNCE0024W
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YBR201C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YCL048W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YKL065W-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR010C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
PC538 |
YEP-Gal solid medium for 24 hr |
YPR145C-A
|
PubMed
Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 |
Indirect |
RNA-seq - wt vs TF mutant |
Negative |
PC538 |
YEP-Gal solid medium for 24 hr |