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Modelling prediction
Essentiality
[metab] Optimisation
manipulating gene expression
manipulating TF expression
Cross species
Promoter analysis
Homologous network
Network comparison
Rank by Unique TFBS
Rank genes
Rank by TF
Rank by GO
Regulatory Associations
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Pattern Matching
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IUPAC Code Generation
ORF List ⇔ Gene List
Retrieve
TF-Consensus List
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Upstream Sequence
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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References
Evidence
Code
Evidence
Experiment
Association
Type
Strain
Environmental
Condition
Rtg3p
YGR209C
PubMed
Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3):
Zyrina AN et al., Appl Environ Microbiol, 2017 Feb 1;83(3):
Indirect
GFP - wt vs TF mutant
Negative
S288c
Cells were grown overnight at 30.C with 106 rotary shaking (250 rpm) to the density of 2 x 106 cells mL-1 in liquid YPD medium
Indirect
GFP - wt vs TF mutant
Negative
MATa his3DELTA1 leu2DELTA0 met15DELTA0 ura3DELTA0 TRX2-GFP
Trx2-GFP mutant vs Trx2-GFP DELTArtg3 mutant: cells were grown in YPD medium