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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Sfp1p
|
YBL072C
|
PubMed
Marion RM et al., Proc Natl Acad Sci U S A, 2004;():Marion RM et al., Proc Natl Acad Sci U S A, 2004;(): |
Direct |
ChIP |
N/A |
S288c |
YPD |
PubMed
Jorgensen P et al., Genes Dev, 2004 Oct 15;18(20):2491-505Jorgensen P et al., Genes Dev, 2004 Oct 15;18(20):2491-505 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288C |
Cells were grown for 8hrs in log phase in rich glucose media and harvested. |
PubMed
Gertz J et al., Genome Res, 2005 Aug;15(8):1145-52Gertz J et al., Genome Res, 2005 Aug;15(8):1145-52 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Mid-exponential phase cells cultivated in YPD growth medium |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium; mid-log phase |
PubMed
Reja R et al., Genes Dev, 2015 Sep 15;29(18):1942-54Reja R et al., Genes Dev, 2015 Sep 15;29(18):1942-54 |
Direct |
ChIP-exo |
N/A |
S288c |
Strain was grown to OD600 0.8 at 25.C in 500 mL of YPD |
PubMed
, , ;():, , ;(): |
Direct |
ChIP-seq |
N/A |
W303 |
YP ( galactose as carbon source) |
Direct |
ChIP-seq |
N/A |
W303 |
YP ( glucose as carbon source) |
Direct |
ChIP-seq |
N/A |
W303 |
YP ( raffinose as carbon source) |
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