S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Sko1p	YOL151W	PubMed Garcia-Gimeno MA et al., Mol Cell Biol, 2000 Jun;20(12):4340-9	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Osmotic stress
		PubMed Proft M et al., EMBO J, 2001 Mar 1;20(5):1123-33	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	osmotic stress (brief treatment with NaCl); cells grown to mid log phase in synthetic medium
		PubMed Rep M et al., Mol Microbiol, 2001 Jun;40(5):1067-83	Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Osmotic shock; 0.7 M NaCl added to cells grown in YPD medium to mid-exponential phase
			Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Osmotic shock; 0.8 M NaCl added to cells grown in YPD medium to mid-exponential phase
			Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Oxidative stress; 0.1 mM H2O2 added to cells grown in YPD medium to mid-exponential phase
			Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Oxidative stress; 0.5 mM formaldehyde added to cells grown in YPD medium to mid-exponential phase
			Indirect	Northern blot - wt vs TF mutant	Negative	W303-1A	Oxidative stress; 0.5 mM H2O2 added to cells grown in YPD medium to mid-exponential phase
		PubMed Kobayashi Y et al., Biochem Biophys Res Commun, 2008 Mar 28;368(1):50-5	Indirect	Northern blot - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Capaldi AP et al., Nat Genet, 2008;():Capaldi AP et al., Nat Genet, 2008;():	Direct	ChIP	N/A	S288c	N/A
		PubMed Ni L et al., Genes Dev, 2009 Jun 1;23(11):1351-63	Direct	Chip-on-chip	N/A	S288c	SD medium
		PubMed Ni L et al., Genes Dev, 2009 Jun 1;23(11):1351-63	Direct	Chip-on-chip	N/A	S288c	SD medium + NaCl 0,6M
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	YPD medium; mid-log phase
		PubMed Cook KE et al., G3 (Bethesda), 2012;():Cook KE et al., G3 (Bethesda), 2012;():	Direct	ChIP-seq	N/A	S288c	0,4M NaCl
		PubMed Yamaguchi Y et al., Mol Microbiol, 2018 Feb;107(3):363-386	Indirect	alpha-galactosidase - wt vs TF mutant	Negative	BY4741	Doxycyclin treatment for 8h
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C