S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ste12p	YCL027W	PubMed Hagen DC et al., Mol Cell Biol, 1991 Jun;11(6):2952-61	Indirect	lacZ - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed McCaffrey G et al., Mol Cell Biol, 1987 Aug;7(8):2680-90	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	N/A
		PubMed Oehlen LJ et al., Mol Cell Biol, 1996 Jun;16(6):2830-7	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	haploid-invasive growth conditions; Haploid cells grown in YPD rich medium
		PubMed Urnov FD, Biochem Cell Biol, 2002;80(3):321-33	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Zeitlinger J et al., Cell, 2003 May 2;113(3):395-404	Direct	Chip-on-chip	N/A	S288c	YPD medium + alpha-factor
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Positive	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
		PubMed LefranÃ§ois P et al., BMC Genomics, 2009;():	Direct	ChIP-seq	N/A	S288c	Pseudohyphal growth conditions (nitrogen depleted SLAD medium)
		PubMed Yang HY et al., EMBO J, 2009 May 20;28(10):1380-91	Indirect	lacZ - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Pitoniak A et al., Mol Biol Cell, 2009 Jul;20(13):3101-14	Indirect	lacZ - wt vs TF mutant	Positive	S288c	YPGal medium; mid-log phase
		PubMed Birkaya B et al., Eukaryot Cell, 2009 Aug;8(8):1118-33	Indirect	lacZ - wt vs TF mutant	Positive	S288c	cells grown in YP Galactose to mid-log phase
		PubMed Heise B et al., Eukaryot Cell, 2010 Apr;9(4):514-31	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	SC medium; mid-log phase
		PubMed Zheng W et al., Nature, 2010 Apr 22;464(7292):1187-91	Direct	ChIP-seq	N/A	S288c	YPD medium + alpha-factor
		PubMed Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883	Indirect	lacZ - wt vs TF mutant	Positive	SIGMA1278b	FUS1-lacZ expression in wt vs DELTAste12 was monitored in the indicated strains in mid-log phase grown in YEPD medium.
		PubMed Arroyo J et al., Mol Microbiol, 2011;():	Indirect	RT-PCR - wt vs TF mutant	Negative	S288c	Yeast strains were grown in YPDt o an optical density (OD600) of 0.1. Cultures were split up and treated with OGT2468 at final concentrations of 0.1 µM or 1 µM, and DMSO (final concentration 1%) for 3h
		PubMed Vidal SE et al., Cell Rep, 2013 Feb 21;3(2):328-34	Direct	ChIP	N/A	S288c	Pheromone induction
		PubMed Villasmil ML et al., Cell Cycle, 2016;15(3):441-54	Indirect	lacZ - wt vs TF overexpression	Positive	S288c	Absence of pheromone, in a DELTAbar1 strain
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C