S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ste12p	YGR014W	PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	haploid-invasive growth conditions; Haploid cells grown in YPD rich medium
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Zeitlinger J et al., Cell, 2003 May 2;113(3):395-404	Direct	Chip-on-chip	N/A	S288c	YPD medium + alpha-factor
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Borneman AR et al., Genes Dev, 2006 Feb 15;20(4):435-48	Direct	Chip-on-chip	N/A	S288c	Low nitrogen (SLAD) medium
		PubMed Borneman AR et al., Funct Integr Genomics, 2007 Oct;7(4):335-45	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed LefranÃ§ois P et al., BMC Genomics, 2009;():	Direct	ChIP-seq	N/A	S288c	Pseudohyphal growth conditions (nitrogen depleted SLAD medium)
		PubMed Pitoniak A et al., Mol Biol Cell, 2009 Jul;20(13):3101-14	Indirect	lacZ - wt vs TF mutant	Positive	S288c	YPGal medium; mid-log phase
		PubMed Heise B et al., Eukaryot Cell, 2010 Apr;9(4):514-31	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	SC medium; mid-log phase
		PubMed Zheng W et al., Nature, 2010 Apr 22;464(7292):1187-91	Direct	ChIP-seq	N/A	S288c	YPD medium; mid-log phase
		PubMed Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883	Direct	ChIP	N/A	SIGMA1278b	Binding to the MSB2 promoter in wt cells or DELTAsin3 cells, containing Ste12p-HA. Cells were grown in YEPD medium for 8 h
			Indirect	RT-PCR - wt vs TF mutant	Negative	SIGMA1278b	wt vs DELTAste12: total RNA was isolated from 25 ml cultures grown in YEP GAL for 8h.
		PubMed van der Felden J et al., Mol Cell Biol, 2014 Jun;34(12):2283-93	Direct	ChIP	N/A	S288c	SC medium
		PubMed Chow J et al., Genetics, 2019 Jul;212(3):667-690	Indirect	RNA-seq - wt vs TF mutant	Positive	PC538	YEP-Gal solid medium for 24 hr