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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Ste12p YIR019C PubMed external link Rupp S et al., EMBO J, 1999 Mar 1;18(5):1257-69Rupp S et al., EMBO J, 1999 Mar 1;18(5):1257-69 Indirect Northern blot - wt vs TF mutant Positive S288c SD medium; mid-log phase
PubMed external link Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5 Indirect Microarray analysis - wt vs TF mutant Positive S288c haploid-invasive growth conditions; Haploid cells grown in YPD rich medium
PubMed external link Köhler T et al., Eukaryot Cell, 2002 Oct;1(5):673-86Köhler T et al., Eukaryot Cell, 2002 Oct;1(5):673-86 Indirect lacZ - wt vs TF mutant Positive S288c cells grown to mid log phase in synthetic medium; Δtec1 expressing a single copy of TEC1
PubMed external link Güldener U et al., Mol Biol Cell, 2004 Aug;15(8):3811-28Güldener U et al., Mol Biol Cell, 2004 Aug;15(8):3811-28 Indirect GFP - wt vs TF mutant Positive S288c Minimal medium; mid-log phase
PubMed external link van Dyk D et al., Genetics, 2005 Jan;169(1):91-106van Dyk D et al., Genetics, 2005 Jan;169(1):91-106 Indirect Northern blot - wt vs TF mutant Positive S288c SCD medium
PubMed external link Borneman AR et al., Genes Dev, 2006 Feb 15;20(4):435-48Borneman AR et al., Genes Dev, 2006 Feb 15;20(4):435-48 Direct Chip-on-chip N/A S288c Low nitrogen (SLAD) medium
PubMed external link Chen H et al., Genes Dev, 2006 May 1;20(9):1150-61Chen H et al., Genes Dev, 2006 May 1;20(9):1150-61 Indirect RT-PCR - wt vs TF mutant Positive S288c cells grown to mid-exponential phase in synthetic medium incubated 4h with aromatic alcohols (phenylethanol and tryptophol)
PubMed external link Borneman AR et al., Funct Integr Genomics, 2007 Oct;7(4):335-45Borneman AR et al., Funct Integr Genomics, 2007 Oct;7(4):335-45 Direct Chip-on-chip N/A S288c N/A
PubMed external link Lefrançois P et al., BMC Genomics, 2009;():Lefrançois P et al., BMC Genomics, 2009;(): Direct ChIP-seq N/A S288c Pseudohyphal growth conditions (nitrogen depleted SLAD medium)
PubMed external link Birkaya B et al., Eukaryot Cell, 2009 Aug;8(8):1118-33Birkaya B et al., Eukaryot Cell, 2009 Aug;8(8):1118-33 Indirect Northern blot - wt vs TF mutant Positive S288c cells grown in YP Galactose to mid-log phase
PubMed external link Heise B et al., Eukaryot Cell, 2010 Apr;9(4):514-31Heise B et al., Eukaryot Cell, 2010 Apr;9(4):514-31 Indirect RT-PCR - wt vs TF mutant Positive S288c SC medium; mid-log phase
PubMed external link Zheng W et al., Nature, 2010 Apr 22;464(7292):1187-91Zheng W et al., Nature, 2010 Apr 22;464(7292):1187-91 Direct ChIP-seq N/A S288c YPD medium; mid-log phase
PubMed external link Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883Chavel CA et al., PLoS Genet, 2010 Mar 19;6(3):e1000883 Indirect RT-PCR - wt vs TF mutant Negative SIGMA1278b wt vs DELTAste12: total RNA was isolated from 25 ml cultures grown in YEP GAL for 8h.
PubMed external link van der Felden J et al., Mol Cell Biol, 2014 Jun;34(12):2283-93van der Felden J et al., Mol Cell Biol, 2014 Jun;34(12):2283-93 Direct ChIP N/A S288c SC medium
PubMed external link Chow J et al., Genetics, 2019 Jul;212(3):667-690Chow J et al., Genetics, 2019 Jul;212(3):667-690 Indirect RT-PCR - wt vs TF mutant Positive PC538 YPD medium
Indirect RNA-seq - wt vs TF mutant Positive PC538 YEP-Gal solid medium for 24 hr
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