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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Stp1p YBR068C PubMed external link Jorgensen MU et al., Curr Genet, 1997 Mar;31(3):241-7Jorgensen MU et al., Curr Genet, 1997 Mar;31(3):241-7 Indirect lacZ - wt vs TF mutant Positive S288c Minimal medium; mid-log phase
PubMed external link de Boer M et al., Nucleic Acids Res, 2000 Feb 15;28(4):974-81de Boer M et al., Nucleic Acids Res, 2000 Feb 15;28(4):974-81 Indirect lacZ - wt vs TF mutant Positive S288c 2mM leucine
PubMed external link Nielsen PS et al., Mol Gen Genet, 2001 Jan;264(5):613-22Nielsen PS et al., Mol Gen Genet, 2001 Jan;264(5):613-22 Direct EMSA N/A S288c N/A
PubMed external link Wielemans K et al., J Biol Chem, 2010 Jan 8;285(2):855-65Wielemans K et al., J Biol Chem, 2010 Jan 8;285(2):855-65 Indirect lacZ - wt vs TF mutant Positive S288c 5mM (high) Phenylalanine
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Palavecino MD et al., J Amino Acids, 2015;():Palavecino MD et al., J Amino Acids, 2015;(): Direct ChIP N/A S288c Leucine
PubMed external link Muñoz SA et al., Microbiology (Reading), 2020 Jan;166(1):85-92Muñoz SA et al., Microbiology (Reading), 2020 Jan;166(1):85-92 Direct ChIP Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM ammonium sulfate as a nitrogen source + 1.3mM leucine for 1h
Direct ChIP Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM proline as a nitrogen source + 1.3mM leucine for 1h
Direct ChIP N/A DEBY01 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Direct ChIP N/A DEBY01 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM ammonium sulfate as a nitrogen source
Indirect lacZ - wt vs TF mutant Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM ammonium sulfate as a nitrogen source + 1.3mM leucine for 1h
Indirect lacZ - wt vs TF mutant Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM proline as a nitrogen source
Indirect lacZ - wt vs TF mutant Positive KW018 minimal medium containing 0.17% Difco yeast nitrogen base (yeast nitrogen base without amino acids and ammonium sulfate) with 2% glucose as a carbon source and 10mM proline as a nitrogen source + 1.3mM leucine for 1h
Indirect lacZ - wt vs TF mutant Positive KW018 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive KW018 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect lacZ - wt vs TF mutant Positive KW018 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect lacZ - wt vs TF mutant Positive KW018 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive KW022 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive KW022 Cells grown on minimal medium with 2% glucose and 10mM ammonium sulfate up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive KW022 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with 1.3 mM leucine for 1 hour.
Indirect LacZ - WT vs. TF double mutant Positive KW022 Cells grown on minimal medium with 2% glucose and 10mM proline up to an OD600nm of 0.5-0.9 were harvested and transferred to fresh medium with the same composition for 1 hour.
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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