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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Stp1p
|
YGR055W
|
PubMed
Eckert-Boulet N et al., Yeast, 2004 Jun;21(8):635-48Eckert-Boulet N et al., Yeast, 2004 Jun;21(8):635-48 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
M4054 |
SD liquid medium + uracil, 30.C, pH=4.6 after 2mM L-citrulline exposure during 30 minutes. The cultures were grown from OD600 = 0.01 to OD600 = 2. |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
M4054 |
SD liquid medium + uracil, 30.C, pH=4.6. The cultures were grown from OD600 = 0.01 to OD600 = 2. |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
SC medium; mid-log phase |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Tanaka N et al., Biochem Biophys Res Commun, 2015;():Tanaka N et al., Biochem Biophys Res Commun, 2015;(): |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
S288c |
YPD + tryptophan (1mg/mL) in a DELTAstp2 background |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
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