The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Sum1p
|
YPR054W
|
PubMed
Xie J et al., EMBO J, 1999 Nov 15;18(22):6448-54Xie J et al., EMBO J, 1999 Nov 15;18(22):6448-54 |
Indirect |
Northern blot - wt vs TF mutant |
Negative |
S288c |
SD medium; mid-log phase |
PubMed
Lindgren A et al., EMBO J, 2000 Dec 1;19(23):6489-97Lindgren A et al., EMBO J, 2000 Dec 1;19(23):6489-97 |
Indirect |
Northern blot - wt vs TF mutant |
Negative |
S288c |
early and late phase of the sporulating program (0-4h and 24h of incubation in sporulating medium, respectively) |
PubMed
Pak J et al., Mol Cell Biol, 2002 Sep;22(18):6417-29Pak J et al., Mol Cell Biol, 2002 Sep;22(18):6417-29 |
Indirect |
lacZ - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Pierce M et al., Mol Cell Biol, 2003 Jul;23(14):4814-25Pierce M et al., Mol Cell Biol, 2003 Jul;23(14):4814-25 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Ahmed NT et al., Mol Cell Biol, 2009 Aug;29(16):4352-62Ahmed NT et al., Mol Cell Biol, 2009 Aug;29(16):4352-62 |
Direct |
ChIP |
N/A |
S288c |
meiotic cells |
PubMed
Gurvitz A et al., FEMS Yeast Res, 2009 Sep;9(6):821-31Gurvitz A et al., FEMS Yeast Res, 2009 Sep;9(6):821-31 |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
yAG561 |
Liquid oleic acid medium (YPO) |
PubMed
Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
S288c |
YPD medium; mid-log phase |
PubMed
Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 |
Direct |
ChIP-exo |
N/A |
BY4741 |
YPD medium, 25.C |
|