S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Swi5p	YDL227C	PubMed Dohrmann PR et al., Genes Dev, 1992 Jan;6(1):93-104	Indirect	lacZ - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Breeden L et al., Cell, 1987 Feb 13;48(3):389-97	Indirect	Northern blot - wt vs TF mutant	Positive	G45	YPD
		PubMed Dohrmann PR et al., Mol Cell Biol, 1996 Apr;16(4):1746-58	Direct	DNA footprinting	N/A	S288c	in vitro
		PubMed McBride HJ et al., J Biol Chem, 1999 Jul 23;274(30):21029-36	Direct	DNA footprinting	Positive	W303	Exponential-phase cells cultivated in synthetic growth medium
		PubMed Madhani HD et al., Proc Natl Acad Sci U S A, 1999 Oct 26;96(22):12530-5	Direct	ChIP	N/A	S288c	Synchronized cells at G1 phase
		PubMed Lee TI et al., Science, 2002 Oct 25;298(5594):799-804	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Voth WP et al., EMBO J, 2007 Oct 17;26(20):4324-34	Direct	Chip-on-chip	N/A	S288c	N/A
		PubMed Takahata S et al., J Biol Chem, 2011 Oct 7;286(40):34809-19	Direct	ChIP	N/A	S288c	YPD medium; mid-log phase
		PubMed Parnell EJ et al., J Biol Chem, 2014 Dec 19;289(51):35431-7	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	SC medium
		PubMed Yarrington RM et al., Genetics, 2016 Feb;202(2):551-63	Indirect	RT-PCR - wt vs TF mutant	Positive	S288c	logarithmically growing cells
		PubMed Parnell EJ et al., Genetics, 2019 Aug;212(4):1181-1204	Indirect	RT-PCR - wt vs. TF mutant	Positive	W303	YPA ( 2% dextrose), 30.C
		PubMed Yarrington RM et al., Genetics, 2020 Jun;215(2):407-420	Direct	ChIP	N/A	W303	Synchronized growing cells (GALp::CDC20 strain grown at 25. in yeast extract and peptone medium containing 2% galactose and 2% raffinose)
			Indirect	RT-PCR - wt vs. TF mutant	Positive	W303	YPD medium 30.C