S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Ume6p	YBL078C	PubMed Williams RM et al., Proc Natl Acad Sci U S A, 2002 Oct 15;99(21):13431-6	Indirect	Microarray analysis - wt vs TF mutant	Negative	SK1	Cells grown in YPAcetate medium to late log phase
			Indirect	Microarray analysis - wt vs TF mutant	Negative	SK1	Cells grown in YPD medium to late log phase
		PubMed Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104	Direct	Chip-on-chip	N/A	S288c	YPD medium; mid-log phase
		PubMed Bartholomew CR et al., Proc Natl Acad Sci U S A, 2012 Jul 10;109(28):11206-10	Indirect	Western blot - wt vs TF mutant	Negative	S288c	Cells under nitrogen limitation
		PubMed Aihara M et al., J Cell Sci, 2014;():Aihara M et al., J Cell Sci, 2014;():	Direct	ChIP	N/A	S288c	Nitrogen starvation
		PubMed Lardenois A et al., Mol Genet Genomics, 2015 Oct;290(5):2031-46	Indirect	Microarray analysis - wt vs TF mutant	Negative	S288c	YPA growth
		PubMed Bernard A et al., Autophagy, 2015 Nov 2;11(11):2114-2122	Indirect	RT-PCR - wt vs TF mutant	Negative	S288c	mid-log phase - YPD
		PubMed Willis SD et al., Mol Biol Cell, 2020 May 1;31(10):1015-1031	Indirect	RT-PCR - wt vs TF mutant	Negative	W303	SD medium
			Indirect	RT-PCR - wt vs TF mutant	Negative	W303	SD medium + 2.5mg/L rapamycin
		PubMed Kim B et al., Autophagy, 2021 Apr;17(4):1013-1027	Indirect	RT-PCR - wt vs TF mutant	Negative	BY4741	SD medium
		PubMed Kim B et al., Autophagy, 2021 Apr;17(4):1013-1027	Indirect	RT-PCR - wt vs TF mutant	Negative	BY4741	SD medium - N (nitrogen starvation for 2h)
		PubMed Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314	Direct	ChIP-exo	N/A	BY4741	YPD medium, 25.C