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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Ume6p YJL153C PubMed external link Jackson JC et al., Nucleic Acids Res, 1996 Apr 1;24(7):1322-9Jackson JC et al., Nucleic Acids Res, 1996 Apr 1;24(7):1322-9 Indirect CAT - wt vs TF mutant Negative S288c Complete medium + 75mM inositol + 1mM choline
PubMed external link Goldmark JP et al., Cell, 2000 Oct 27;103(3):423-33Goldmark JP et al., Cell, 2000 Oct 27;103(3):423-33 Direct ChIP N/A W303 YEPD; 30.C; early-log phase
Indirect Northern blot - wt vs TF mutant Negative W303 YEPD; 30.C; early-log phase
PubMed external link Williams RM et al., Proc Natl Acad Sci U S A, 2002 Oct 15;99(21):13431-6Williams RM et al., Proc Natl Acad Sci U S A, 2002 Oct 15;99(21):13431-6 Indirect Microarray analysis - wt vs TF mutant Negative W303 Cells grown in YPAcetate medium to late log phase
Indirect Microarray analysis - wt vs TF mutant Negative SK1 Cells grown in YPD medium to late log phase
PubMed external link Pnueli L et al., Mol Cell Biol, 2004 Jun;24(12):5197-208Pnueli L et al., Mol Cell Biol, 2004 Jun;24(12):5197-208 N/A N/A S288c N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Carrozza MJ et al., Biochim Biophys Acta, 2005;():Carrozza MJ et al., Biochim Biophys Acta, 2005;(): Indirect RT-PCR - wt vs TF mutant Negative S288c YPD medium; mid-log phase
PubMed external link Yukawa M et al., Biosci Biotechnol Biochem, 2009 Feb;73(2):378-84Yukawa M et al., Biosci Biotechnol Biochem, 2009 Feb;73(2):378-84 Indirect Northern blot - wt vs TF mutant Negative MYC500 YPA 2% potassium acetate instead of the glucose in YPD) 28.C
Indirect Northern blot - wt vs TF mutant Negative MYC500 YPD 28.C
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Negative S288c YPD medium; mid-log phase
PubMed external link Bartholomew CR et al., Proc Natl Acad Sci U S A, 2012 Jul 10;109(28):11206-10Bartholomew CR et al., Proc Natl Acad Sci U S A, 2012 Jul 10;109(28):11206-10 Direct ChIP N/A S288c Cells under nitrogen limitation
PubMed external link Lardenois A et al., Mol Genet Genomics, 2015 Oct;290(5):2031-46Lardenois A et al., Mol Genet Genomics, 2015 Oct;290(5):2031-46 Indirect Microarray analysis - wt vs TF mutant Negative S288c YPD
PubMed external link Ravi C et al., Curr Genet, 2019 Aug;65(4):995-1014Ravi C et al., Curr Genet, 2019 Aug;65(4):995-1014 Indirect BETA-galactosidase assay Negative BY4741 synthetic complete medium-Ura 30 .C for 4 h
Indirect BETA-galactosidase assay Negative BY4741 synthetic complete medium-Ura with 75 microM inositol, 30 .C for 4 h
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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