Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Upc2p
|
YLR056W
|
PubMed
Vik A et al., Mol Cell Biol, 2001 Oct;21(19):6395-405Vik A et al., Mol Cell Biol, 2001 Oct;21(19):6395-405 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
W303-1a |
Cells grown in minimal medium (16 h) with 40 microg/mL lovastatin |
Indirect |
lacZ - wt vs TF mutant |
Positive |
W303-1a |
Cells grown in minimal medium (16 h) with or without 40 microg/mL lovastatin |
PubMed
Wilcox LJ et al., J Biol Chem, 2002 Sep 6;277(36):32466-72Wilcox LJ et al., J Biol Chem, 2002 Sep 6;277(36):32466-72 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
W303-1A |
Cells grown aerobically in YPD medium to exponential phase |
PubMed
Davies BS et al., Mol Cell Biol, 2005 Aug;25(16):7375-85Davies BS et al., Mol Cell Biol, 2005 Aug;25(16):7375-85 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
JRY7179 |
Complete synthetic medium (CSM; 0.67%Difco yeast nitrogen base without amino acids, complete supplemental mixture minus appropriate amino acids) containing 2% glucose; mid-log phase. |
PubMed
Davies BS et al., Genetics, 2006 Sep;174(1):191-201Davies BS et al., Genetics, 2006 Sep;174(1):191-201 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
W303 |
Cells were grown aerobically in complete synthetic medium containing 2% glucose with ketoconazole |
Indirect |
RT-PCR - wt vs TF mutant |
Negative |
W303 |
Cells were grown in complete synthetic medium containing 2% glucose in tightly capped 50 ml flasks without shaking at 30. (hypoxic conditions) |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
W303 |
Cells were grown in complete synthetic medium containing 2% glucose in tightly capped 50 ml flasks without shaking at 30. (hypoxic conditions) with hemin |
Indirect |
RT-qPCR (WT vs TF mutant) |
Negative |
W303 |
Cells were grown in complete synthetic medium containing 2% glucose in tightly capped 50 ml flasks without shaking at 30. (hypoxic conditions) with hemin |
PubMed
Gallo-Ebert C et al., J Biol Chem, 2013 Dec 6;288(49):35466-77Gallo-Ebert C et al., J Biol Chem, 2013 Dec 6;288(49):35466-77 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
S288c |
Cells were grown to exponential phase at 30 .C in synthetic medium. Cells with pRS-ERG3 plasmid that contained ( ) or lacked ( ) all three SRE/AR1 c elements. |
PubMed
Woods K et al., Mol Microbiol, 2016 Feb;99(3):512-27Woods K et al., Mol Microbiol, 2016 Feb;99(3):512-27 |
Indirect |
lacZ - wt vs TF mutant |
Positive |
S288c |
Medium with 2% galactose |
PubMed
Serratore ND et al., Genetics, 2018 Mar;208(3):1037-1055Serratore ND et al., Genetics, 2018 Mar;208(3):1037-1055 |
Indirect |
RT-PCR - wt vs TF mutant |
Positive |
W303 and/or S288C strains (I do not have access to the supplementary data of the article) |
wt, DELTAupc2 and DELTAupc2DELTAset4 cells were grown in SC medium at 30.C, in hypoxia conditions |