S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition
Yap1p	YDR135C	PubMed Wemmie JA et al., J Biol Chem, 1994 Dec 23;269(51):32592-7	Direct	DNA footprinting	N/A	S288c	YPD medium; mid-log phase
		PubMed Jungwirth H et al., Eur J Biochem, 2000 Aug;267(15):4809-16	N/A		N/A	S288c	N/A
		PubMed Sharma KG et al., Eukaryot Cell, 2002 Jun;1(3):391-400	Indirect	lacZ - wt vs TF overexpression	Positive	S288c	Minimal medium; mid-log phase
		PubMed Menezes RA et al., FEBS Lett, 2004;():Menezes RA et al., FEBS Lett, 2004;():	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	arsenic stress (arsenate and arsenite)
		PubMed Haugen AC et al., Genome Biol, 2004;5(12):R95	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	Synthetic complete medium after 2h exposure to 100 microM AsIII (30.C).
		PubMed Lucau-Danila A et al., Mol Cell Biol, 2005 Mar;25(5):1860-8	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium + 20 mg/L benomyl
		PubMed Tan K et al., Proc Natl Acad Sci U S A, 2008 Feb 26;105(8):2934-9	Direct	Chip-on-chip	N/A	S288c	SC medium + MMS (methylmethanesulfonate)
		PubMed Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33	Direct	Chip-on-chip	N/A	BY4742	YPD + Sodium selenite (1 mM), hydrogen peroxide (0.3 mM) or benomyl (20 microg/ml)
			Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4742	YPD
			Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4742	YPD+1mM selenite 40 min
			Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4742	YPD+1mM selenite 60 min
			Indirect	Microarray analysis - wt vs TF mutant	Negative	BY4742	YPD+1mM selenite 80 min
		PubMed Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	YPD medium; mid-log phase
		PubMed Dejos C et al., FEBS Lett, 2013 Sep 17;587(18):3045-51	Direct	RT-PCR - wt vs mutant promoter sequence	Positive	S288c	YNB medium
		PubMed da Silva SM et al., Biochim Biophys Acta Gen Subj, 2018 Oct;1862(10):2152-2161	Indirect	RT-PCR - wt vs TF mutant	Positive	BY4741	YPD + 2â€¯mM arsenic