Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Yap1p
|
YLL060C
|
PubMed
DeRisi JL et al., Science, 1997 Oct 24;278(5338):680-6DeRisi JL et al., Science, 1997 Oct 24;278(5338):680-6 |
Indirect |
Microarray analysis - wt vs TF overexpression |
Positive |
S288c |
Exponential-phase cells cultivated in YPD supplemented with 2% galactose to induce protein expression |
PubMed
Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
YPD medium; mid-log phase |
PubMed
Haugen AC et al., Genome Biol, 2004;5(12):R95Haugen AC et al., Genome Biol, 2004;5(12):R95 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4741 |
Synthetic complete medium after 2h exposure to 100 microM AsIII (30.C). |
PubMed
Lucau-Danila A et al., Mol Cell Biol, 2005 Mar;25(5):1860-8Lucau-Danila A et al., Mol Cell Biol, 2005 Mar;25(5):1860-8 |
Direct |
ChIP |
N/A |
S288c |
YPD medium + 20 mg/L benomyl |
PubMed
Dubacq C et al., Mol Genet Genomics, 2006 Feb;275(2):114-24Dubacq C et al., Mol Genet Genomics, 2006 Feb;275(2):114-24 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
YPD medium + 200mM hydroxyurea |
PubMed
Workman CT et al., Science, 2006 May 19;312(5776):1054-9Workman CT et al., Science, 2006 May 19;312(5776):1054-9 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
PubMed
Barreto L et al., Eukaryot Cell, 2006 Oct;5(10):1748-59Barreto L et al., Eukaryot Cell, 2006 Oct;5(10):1748-59 |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in SC medium until a concentration of 1.5E07 cells per mL then 5 microg/mL CdCl2 was added and samples obtained after 30 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in SC medium until a concentration of 1.5E07 cells per mL then 5 microg/mL CdCl2 was added and samples obtained after 60 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 0.2 mM 1-chloro-2,4-dinitrobenzene (CDNB) was added and samples obtained after 30 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 0.2 mM 1-chloro-2,4-dinitrobenzene (CDNB) was added and samples obtained after 60 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 1 mM t-BOOH was added and samples obtained after 30 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 1 mM t-BOOH was added and samples obtained after 60 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 2.5 mM diamide was added and samples obtained after 30 min. |
Indirect |
Northern blot - wt vs TF mutant |
Positive |
W303-1A |
Cells were grown in YPD medium until a concentration of 1.5E07 cells per mL then 2.5 mM diamide was added and samples obtained after 60 min. |
PubMed
Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33Salin H et al., BMC Genomics, 2008 Jul 15;0(0):33 |
Direct |
Chip-on-chip |
N/A |
BY4742 |
YPD + Sodium selenite (1 mM), hydrogen peroxide (0.3 mM) or benomyl (20 microg/ml) |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
BY4742 |
YPD |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
BY4742 |
YPD+1mM selenite 40 min |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
BY4742 |
YPD+1mM selenite 60 min |
Indirect |
Microarray analysis - wt vs TF mutant |
Negative |
BY4742 |
YPD+1mM selenite 80 min |
PubMed
Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488Kelley R et al., PLoS Genet, 2009 May;5(5):e1000488 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4741 |
YPD 30.C from 0.1 mM H2O2 to 0.4 mM H2O2 |
PubMed
Lee SK et al., Nucleic Acids Res, 2013 Dec;41(22):10124-34Lee SK et al., Nucleic Acids Res, 2013 Dec;41(22):10124-34 |
Direct |
ChIP |
N/A |
S288c |
oxidative stress |
PubMed
Zhang C et al., Yeast, 2016 Jan;33(1):5-19Zhang C et al., Yeast, 2016 Jan;33(1):5-19 |
Indirect |
RNA-seq - wt vs TF mutant |
Positive |
S288c |
SD medium + Nourseothricin |
PubMed
da Silva SM et al., Biochim Biophys Acta Gen Subj, 2018 Oct;1862(10):2152-2161da Silva SM et al., Biochim Biophys Acta Gen Subj, 2018 Oct;1862(10):2152-2161 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
BY4741 |
YPD + 2 mM arsenic |