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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition
Zap1p YGL255W PubMed external link Zhao H et al., Mol Cell Biol, 1997 Sep;17(9):5044-52Zhao H et al., Mol Cell Biol, 1997 Sep;17(9):5044-52 N/A N/A S288c N/A
PubMed external link Lyons TJ et al., Proc Natl Acad Sci U S A, 2000 Jul 5;97(14):7957-62Lyons TJ et al., Proc Natl Acad Sci U S A, 2000 Jul 5;97(14):7957-62 Indirect lacZ - wt vs TF overexpression Positive DY1457 Exponential cells grown in synthetic defined medium + zinc
Indirect Microarray analysis - wt vs TF mutant Positive DY1457 Exponential cells grown in synthetic defined medium + zinc
PubMed external link Han GS et al., J Biol Chem, 2001 Mar 30;276(13):10126-33Han GS et al., J Biol Chem, 2001 Mar 30;276(13):10126-33 Indirect lacZ - wt vs TF mutant Positive S288c cells in zinc-deplete media (SD medium without zinc sulfate) weregrown to the exponential phase of growth (A600 nm ; 0.5) in the absence of zinc sulfate
PubMed external link Lee TI et al., Science, 2002 Oct 25;298(5594):799-804Lee TI et al., Science, 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Bird AJ et al., EMBO J, 2004 Mar 10;23(5):1123-32Bird AJ et al., EMBO J, 2004 Mar 10;23(5):1123-32 Indirect Northern blot - wt vs TF mutant Positive S288c Zinc stress
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase
PubMed external link Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50Chua G et al., Proc Natl Acad Sci U S A, 2006 Aug 8;103(32):12045-50 Indirect Microarray analysis - wt vs TF overexpression Positive N/A Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h
PubMed external link Wu CY et al., J Biol Chem, 2007 Jan 26;282(4):2184-95Wu CY et al., J Biol Chem, 2007 Jan 26;282(4):2184-95 Indirect Microarray analysis - wt vs TF mutant Positive S288c zinc depletion
PubMed external link Wu CY et al., BMC Genomics, 2008;():Wu CY et al., BMC Genomics, 2008;(): Direct DNA footprinting Positive S288c SD medium + 2% galactose + 1 μM ZnCl2
PubMed external link Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic Acids Res, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase
PubMed external link Frey AG et al., J Biol Chem, 2011 Feb 25;286(8):6844-54Frey AG et al., J Biol Chem, 2011 Feb 25;286(8):6844-54 Indirect lacZ - wt vs TF mutant Positive S288c LZM (Low Zinc Medium) + 3microM ZnCl2
PubMed external link Toesca I et al., PLoS Genet, 2011 Jun;7(6):e1002163Toesca I et al., PLoS Genet, 2011 Jun;7(6):e1002163 Direct ChIP N/A S288c zinc depletion
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C
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