S.cerevisiae - Yeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

SMD1

Promoter Sequence

Consensus
WTAWTW: -894 -885 -882 -438 -223 -201 -193 -179 -166 -163 -101 -92

>SMD1    upstream sequence, from -1000 to -1, size 1000
AGTAAAGTATTCAAAAACTCGACATATTCTCGGTGCAATTTCTTGTTCGACAACTTATCA
GACTTGGAAAAATGCGCAAATTTCATTAAAACTTGTAAATTCATTGATAATAAGGATAAT
ATTACAATTCCAGATATGAAACTGTCGCCCTACGTAAAGAAATTCACTCAAACATCAAAA
AAGGATGCCGCGCTAGTAGGAACAATTGAAGAAGACGAAATTTTTAAAACATTTATGAAT
TCAATGAAACAGCTGAATGAAAATGACGAGTACTCATTCCAAGATTTTAGCGTATTGAAA
TCTTTAGAAAAAGAATTCTCAAAAAGCATAGAGTTAGAAAATAAAATAGCAGAAAGAACA
GAAAGGGTGTTAACAGAGCTGGTTGGAACTGGTGATAAGGTCAAGAATAAGAACAAAAAG
AAGAAAAATAAAAACGCCAAAAAGAAATTCAAAGAAGAGGAAGCATCCGCTAAGATACCA
AAGAAAAAACGGAACAGAGGCAAGAAGAAGCGTGAAAATCGTGAAAAAAGCACCATTTCT
AAGACCAAGAACAGTAATGTGGTTATTATTGAGGAAGCGGGTAAAGAGGTTTTGAAACAA
AGGAAGAAGAAAATGCTTTTGCAAGAGAAGTTAAAAATATCAAACTCCTCTCAGCCTCAG
TCATCATCCGCTCAAACCCAGCCGTCGTTCCAACCTAAAGAAAACCTTTTCGTACCACGG
GTAAAAATTTTGCATCGTGATGATACCAAGAAGTAGTAAAAGCTCATGGCTTCTTATATA
TTATATATGGAATACATTTATAATAAAATAATAAGAATTATATATTTTATGATTATATTA
>TTACATAAAGTATTCCCCATTATAAATTCTGAGTTTCGTATTTAATGATTTTTCAATGAA
TATTTAAAATAATAAAATATATGAAATGTTCATATACAATGAAATTGTCATGAAGAAAGA
TGACTCCAAGTATCGTTTATAAATCGTCGAGAAAAAGATT

Promoter Sequence
Complementary Strand

Consensus
WTAWTW: -80 -85 -88 -159 -179 -186 -189 -194 -216 -360 -431 -569 -656 -878 -887

>SMD1	Upstream Sequence Complementary Strand
TCATTTCATAAGTTTTTGAGCTGTATAAGAGCCACGTTAAAGAACAAGCTGTTGAATAGT
CTGAACCTTTTTACGCGTTTAAAGTAATTTTGAACATTTAAGTAACTATTATTCCTATTA
TAATGTTAAGGTCTATACTTTGACAGCGGGATGCATTTCTTTAAGTGAGTTTGTAGTTTT
TTCCTACGGCGCGATCATCCTTGTTAACTTCTTCTGCTTTAAAAATTTTGTAAATACTTA
AGTTACTTTGTCGACTTACTTTTACTGCTCATGAGTAAGGTTCTAAAATCGCATAACTTT
AGAAATCTTTTTCTTAAGAGTTTTTCGTATCTCAATCTTTTATTTTATCGTCTTTCTTGT
CTTTCCCACAATTGTCTCGACCAACCTTGACCACTATTCCAGTTCTTATTCTTGTTTTTC
TTCTTTTTATTTTTGCGGTTTTTCTTTAAGTTTCTTCTCCTTCGTAGGCGATTCTATGGT
TTCTTTTTTGCCTTGTCTCCGTTCTTCTTCGCACTTTTAGCACTTTTTTCGTGGTAAAGA
TTCTGGTTCTTGTCATTACACCAATAATAACTCCTTCGCCCATTTCTCCAAAACTTTGTT
TCCTTCTTCTTTTACGAAAACGTTCTCTTCAATTTTTATAGTTTGAGGAGAGTCGGAGTC
AGTAGTAGGCGAGTTTGGGTCGGCAGCAAGGTTGGATTTCTTTTGGAAAAGCATGGTGCC
CATTTTTAAAACGTAGCACTACTATGGTTCTTCATCATTTTCGAGTACCGAAGAATATAT
AATATATACCTTATGTAAATATTATT>TTATTan>ATTCTTAATATATAAAATACTAATATAAT
AATGTATTTCATAAGGGGTAATATTTAAGACTCAAAGCATAAATTACTAAAAAGTTACTT
ATAAATTTTATTan>ATT>TTATATACTTTACAAGTATATGTTACTTTAACAGTACTTCTTTCT
ACTGAGGTTCATAGCAAATATTTAGCAGCTCTTTTTCTAA