S.cerevisiae - Yeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

VAR1

Promoter Sequence

Consensus
WTAWTW: -1000 -994 -991 -984 -977 -974 -970 -967 -964 -961 -956 -885 -862 -859 -856 -848 -845 -840 -825 -812 -807 -756 -752 -749 -743 -737 -734 -731 -725 -719 -671 -611 -598 -595 -592 -586 -583 -549 -546 -543 -539 -535 -531 -527 -521 -497 -494 -491 -488 -485 -481 -478 -473 -470 -467 -464 -456 -414 -409 -406 -402 -399 -396 -391 -375 -371 -368 -358 -338 -330 -318 -313 -310 -307 -297 -292 -287 -284 -281 -275 -255 -252 -247 -235 -220 -217 -214 -211 -207 -197 -184 -181 -178 -158 -155 -130 -127 -124 -118 -115 -108 -105 -100 -87 -70 -58 -55 -52 -49 -46 -43 -30

>VAR1    upstream sequence, from -1000 to -1, size 1000
TTAATTATATTAan>ATTCTTATTATATAATAan>ATTn>ATTAan>ATAan>ATAan>ATT>TATTTTAAGAAAGGA
GTGAGGGACCCCCTCCCGTTAGGGAGGGGGACCGAACCCCGAAGGAGAAAATAAATTAAT
AAAAGTTTAAAAGTTCTTATATTAan>ATAan>ATTATATAATAan>TTA>TATTAAAGATTTTTATAAT
ATATATATATAATA>TATTTATAGTTCCGGGGCCCGGCCACGGGAGCCGGAACCCCGAAAG
GAGTTTATTTn>AATAan>TTTATATTTATATTAan>ATAan>TTTATATTTATATTTATATTCCTCTTAA
GGATGGTTGACTGAGTGGTTTAAAGTGTGATATTTGAGCTATCATTAGTCTTTATTGGCT
ACGTAGGTTCAAATCCTACATCATCCGTAATAATACATATATATAATAan>ATAan>ATTTTAATA
>TTATTCCTATAAAAATAAAATAAATAAATAAATAATAan>ATAan>ATTn>AATTn>AATTn>AATTn>AATTT
TAATAAATATAAAATATATAAAAATAATAan>ATAan>ATAan>ATAan>ATTn>ATTAan>TTT>TAATAan>ATAan>TTAan>T
TTATATAATAGTCCGGTCCGACCCTTTTTATTCTTAAGAAGGGATTTTATTT>TATTAan>ATT
AATAan>ATAan>ATA>TATTAAAAATTATAAATAATTn>AATAan>ATTCTTTATATTTATATATATATAT
ATATATTTATATATTTATATATATATTT>TAATAan>ATAan>TTATGATATATTT>TATTT>TAATAan>A
TATTTTTATTTTTATATATAAAATTATAATAan>TTT>TATTTTATAAATTATTTATATATAAA
TTATTAan>ATAan>ATAan>ATTn>ATTTTTTTTTATTTGGGATTTATATTAan>TTAan>TTATAAAGAATATAA
TGTTATTAan>ATAACTGCAAAAAATATCTAATATATTAan>TTAan>TTTATAATAan>ATAAATAATAan>TT
A>TAATAAGGATGCATATTATATATATATATATATTTCTATTTATATTAan>ATAan>TTAan>ATAan>TTA
>ATATGTATATATAATAGATAAAAAGTAAAAATAAAAAATA

Promoter Sequence
Complementary Strand

Consensus
WTAWTW: -6 -36 -39 -42 -45 -48 -51 -80 -93 -98 -101 -104 -108 -111 -120 -123 -128 -135 -148 -151 -171 -174 -177 -203 -207 -210 -213 -216 -231 -248 -253 -277 -280 -300 -303 -306 -364 -367 -371 -377 -384 -389 -392 -395 -398 -402 -460 -463 -466 -474 -477 -481 -484 -487 -490 -493 -503 -510 -514 -523 -527 -531 -535 -539 -542 -545 -549 -553 -557 -562 -576 -579 -588 -591 -607 -727 -730 -745 -805 -818 -833 -838 -841 -848 -852 -855 -878 -881 -886 -957 -960 -963 -966 -970 -977 -987 -992

>VAR1	Upstream Sequence Complementary Strand
AATTAATA>TAATTAAGAATAATATATTATTn>AATAan>ATTan>ATTan>ATTAAATAAAATTCTTTCCT
CACTCCCTGGGGGAGGGCAATCCCTCCCCCTGGCTTGGGGCTTCCTCTTTTATT>TAATTan>A
TTTTCAAATTTTCAAGAATATAATTan>ATTn>AATATATTATAan>ATA>TAATTTCTAAAAATATTA
TATATATATATTATATAAATATCAAGGCCCCGGGCCGGTGCCCTCGGCCTTGGGGCTTTC
CTCAAATAAATTATAAATATAAATATAATTan>ATAAATATAAATATAAATATAAGGAGAATT
CCTACCAACTGACTCACCAAATTTCACACTATAAACTCGATAGTAATCAGAAATAACCGA
TGCATCCAAGTTTAGGATGTAGTAGGCATTATTATGTATATATATTATTan>ATTAAAATTAT
AATAAGGATATTTTTATT>TTATTn>TATTn>TATTn>TATTan>ATTan>ATTn>AATTn>AATTn>AATTn>AATTAAA
ATTATTn>TATATTTTATATATTTTTATTan>ATTan>ATTan>ATTan>ATTn>AATAan>ATAAAATTATTan>ATAan>ATA
AATATATTATCAGGCCAGGCTGGGAAAAATAAGAATTCTTCCCTAAAATAAAATAATTn>AA
TTATTan>ATTan>ATA>TAATTTTTAATATTTATTn>AATTan>ATTAAGAAATATAAATATATATATATA
TATATAAATATATAAATATATATATAAAATTATTan>ATAan>ATACTATATAAAATAAAATTATT
>ATAAAAATAAAAATATATATTTTAATA>TTATAAAATAAAATATTTAATAAATATATATTT
AATAan>ATTan>ATTan>ATTn>AATAAAAAAAAATAAACCCTAAATATAATAan>ATAan>ATATTTCTTATATT
ACAATAATTan>ATTGACGTTTTTTATAGATTATA>TAATAan>ATAAATATTATTan>ATTn>TATTan>ATAan>A
TA>TTATTCCTACGTATAATATATATATATATATAAAGATAAATATAATTan>ATAan>ATTan>ATAan>AT
TATACATATATATTATCTATTTTTCATTTTTATTTTTTAT