S.cerevisiae - Yeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

SMN1

Promoter Sequence

Consensus
WTAWTW: -896 -780 -750 -747 -653 -636 -499 -360 -205 -202 -164 -161 -158 -82

>SMN1    upstream sequence, from -1000 to -1, size 1000
TTACACAGAGTATTATCCTCGGCGTTTTCTATCAAAGCTTCTGGTTATTCCATACTTTTT
TCAAGGACAGCAGAAACATATGCCATTTTACACCTCCTGGGAAAATAATTTGTAATTTTC
TAGTGACTCAATGCTTGTTGAAAGTGATCTTGTATAATGAGTGTACACATGAGATGTGCA
AATTTCTTCATTACTTAGCGAGAAGTGTACACTCTTGAATATAATAACACTAACAGTGGA
ATCATCGGTAATAATAan>ATACTATTGATCGTAGTGAAAGCAAAACACGACTGTACTTGAGT
TATAAATTTTGTTGCTGTAGAAATTTCAGTGATCATTCATTAGCAACTTATTAAGATGAC
GATTATATTTTACGGTTCTTTTCACAAACCATTATACTTGCTAAAGGTTGTAAAAGTCAT
ACACTTTTTAACATCAAGATTTCAGTACAACAATTTCTTACATGTAAAATCGTTTGCAAA
TTAAGTTCGCCAAATTGTATCTTAATTAAAATCTATGTGTTCAGAAGTTGAATATTGGTA
AAAAGAAACAAAATGTATAAACGAACGAAAAAGGAAGTGATCAAAATAGAGTAAGGAACC
AAGGCATTAGGTTCACCCGAACGTTATCATATATACGCTCATATTATTCCAAGAAAGACA
CATTTGTCTAGATAGGTTTCGGTAAAGGCGTCCGTAGTTAGAGAGTAGATGGCACTAACT
TGAAAGCAGGAAAACAAACAATTGTGTTCCAGAGCAAACTCGAACTTTCTATCTGAACCA
TTGCATGACGTAAAATTATTAan>TTACAACCATAATGAAACATTTCTACAGTATATCTTTAA
TATTAan>TTTTTTACTTTAGTGTCCTTATCGATCAGTCGCTCTTTCGCCAACTAGCCGCCAA
TTGCAAAAGCCGATAAGCTTATTTCCCCTCAAGCCGTCAACAAGAACTACAGCAATAACA
AAGAGAGTGAATGCAATAAAGGTGTGCGCAACAGTGTAAA

Promoter Sequence
Complementary Strand

Consensus
WTAWTW: -154 -157 -198 -201 -353 -491 -516 -646 -743 -746 -773 -892 -984

>SMN1	Upstream Sequence Complementary Strand
AATGTGTCTCATAATAGGAGCCGCAAAAGATAGTTTCGAAGACCAATAAGGTATGAAAAA
AGTTCCTGTCGTCTTTGTATACGGTAAAATGTGGAGGACCCTTTTATTAAACATTAAAAG
ATCACTGAGTTACGAACAACTTTCACTAGAACATATTACTCACATGTGTACTCTACACGT
TTAAAGAAGTAATGAATCGCTCTTCACATGTGAGAACTTATATTATTGTGATTGTCACCT
TAGTAGCCATTATTan>ATTATGATAACTAGCATCACTTTCGTTTTGTGCTGACATGAACTCA
ATATTTAAAACAACGACATCTTTAAAGTCACTAGTAAGTAATCGTTGAATAATTCTACTG
CTAATATAAAATGCCAAGAAAAGTGTTTGGTAATATGAACGATTTCCAACATTTTCAGTA
TGTGAAAAATTGTAGTTCTAAAGTCATGTTGTTAAAGAATGTACATTTTAGCAAACGTTT
AATTCAAGCGGTTTAACATAGAATTAATTTTAGATACACAAGTCTTCAACTTATAACCAT
TTTTCTTTGTTTTACATATTTGCTTGCTTTTTCCTTCACTAGTTTTATCTCATTCCTTGG
TTCCGTAATCCAAGTGGGCTTGCAATAGTATATATGCGAGTATAATAAGGTTCTTTCTGT
GTAAACAGATCTATCCAAAGCCATTTCCGCAGGCATCAATCTCTCATCTACCGTGATTGA
ACTTTCGTCCTTTTGTTTGTTAACACAAGGTCTCGTTTGAGCTTGAAAGATAGACTTGGT
AACGTACTGCATTTTAATAan>ATAATGTTGGTATTACTTTGTAAAGATGTCATATAGAAATT
ATAan>ATAAAAAATGAAATCACAGGAATAGCTAGTCAGCGAGAAAGCGGTTGATCGGCGGTT
AACGTTTTCGGCTATTCGAATAAAGGGGAGTTCGGCAGTTGTTCTTGATGTCGTTATTGT
TTCTCTCACTTACGTTATTTCCACACGCGTTGTCACATTT